Immunogenicity 5131

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SF3A2
Transcript ID
NM_007165
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (464 aa)
MDFQH
1
RPGGK
6
TGSGG
11
VASSS
16
ESNRD
21
RRERL
26
RQLAL
31
ETIDI
36
NKDPY
41
FMKNH
46
LGSYE
51
CKLCL
56
TLHNN
61
EGSYL
66
AHTQG
71
KKHQT
76
NLARR
81
AAKEA
86
KEAPA
91
QPAPE
96
KVKVE
101
VKKFV
106
KIGRP
111
GYKVT
116
KQRDS
121
EMGQQ
126
SLLFQ
131
IDYPE
136
IAEGI
141
MPRHR
146
FMSAY
151
EQRIE
156
PPDRR
161
WQYLL
166
MAAEP
171
YETIA
176
FKVPS
181
REIDK
186
AEGKF
191
WTHWN
196
RETKQ
201
FFLQF
206
HFKME
211
KPPAP
216
PSLPA
221
GPPGV
226
KRPPP
231
PLMNG
236
LPPRP
241
PLPES
246
LPPPP
251
PGGLP
256
LPPMP
261
PTGPA
266
PSGPP
271
GPPQL
276
PPPAP
281
GVHPP
286
APVVH
291
PPASG
296
VHPPA
301
PGVHP
306
PAPGV
311
HPPAP
316
GVHPP
321
TSGVH
326
PPAPG
331
VHPPA
336
PGVHP
341
PAPGV
346
HPPAP
351
GVHPP
356
APGVH
361
PPPSA
366
GVHPQ
371
APGVH
376
PAAPA
381
VHPQA
386
PGVHP
391
PAPGM
396
HPQAP
401
GVHPQ
406
PPGVH
411
PSAPG
416
VHPQP
421
PGVHP
426
SNPGV
431
HPPTP
436
MPPML
441
RPPLP
446
SEGPG
451
NIPPP
456
PPTN
461
Mutation Information
DNA mutation:
None
Peptide Range:
429 ~ 453
Mut AA position:
441 (13 in Wild Type peptide)
Alignment
Wild Type:
"HPSNPGVHPPTPMPPMLRPPLPSEG
||||||||||||.||||||||||||
Mutant:
HPSNPGVHPPTPLPPMLRPPLPSEG"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SF3A2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay