Immunogenicity 5231
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
ABCA3
Transcript ID
NM_001089
HLA INFO
B*07:02
TCR INFO
No TCR info found!
Full length protein sequence (1704 aa)
MAVLR
1
QLALL
6
LWKNY
11
TLQKR
16
KVLVT
21
VLELF
26
LPLLF
31
SGILI
36
WLRLK
41
IQSEN
46
VPNAT
51
IYPGQ
56
SIQEL
61
PLFFT
66
FPPPG
71
DTWEL
76
AYIPS
81
HSDAA
86
KTVTE
91
TVRRA
96
LVINM
101
RVRGF
106
PSEKD
111
FEDYI
116
RYDNC
121
SSSVL
126
AAVVF
131
EHPFN
136
HSKEP
141
LPLAV
146
KYHLR
151
FSYTR
156
RNYMW
161
TQTGS
166
FFLKE
171
TEGWH
176
TTSLF
181
PLFPN
186
PGPRE
191
PTSPD
196
GGEPG
201
YIREG
206
FLAVQ
211
HAVDR
216
AIMEY
221
HADAA
226
TRQLF
231
QRLTV
236
TIKRF
241
PYPPF
246
IADPF
251
LVAIQ
256
YQLPL
261
LLLLS
266
FTYTA
271
LTIAR
276
AVVQE
281
KERRL
286
KEYMR
291
MMGLS
296
SWLHW
301
SAWFL
306
LFFLF
311
LLIAA
316
SFMTL
321
LFCVK
326
VKPNV
331
AVLSR
336
SDPSL
341
VLAFL
346
LCFAI
351
STISF
356
SFMVS
361
TFFSK
366
ANMAA
371
AFGGF
376
LYFFT
381
YIPYF
386
FVAPR
391
YNWMT
396
LSQKL
401
CSCLL
406
SNVAM
411
AMGAQ
416
LIGKF
421
EAKGM
426
GIQWR
431
DLLSP
436
VNVDD
441
DFCFG
446
QVLGM
451
LLLDS
456
VLYGL
461
VTWYM
466
EAVFP
471
GQFGV
476
PQPWY
481
FFIMP
486
SYWCG
491
KPRAV
496
AGKEE
501
EDSDP
506
EKALR
511
NEYFE
516
AEPED
521
LVAGI
526
KIKHL
531
SKVFR
536
VGNKD
541
RAAVR
546
DLNLN
551
LYEGQ
556
ITVLL
561
GHNGA
566
GKTTT
571
LSMLT
576
GLFPP
581
TSGRA
586
YISGY
591
EISQD
596
MVQIR
601
KSLGL
606
CPQHD
611
ILFDN
616
LTVAE
621
HLYFY
626
AQLKG
631
LSRQK
636
CPEEV
641
KQMLH
646
IIGLE
651
DKWNS
656
RSRFL
661
SGGMR
666
RKLSI
671
GIALI
676
AGSKV
681
LILDE
686
PTSGM
691
DAISR
696
RAIWD
701
LLQRQ
706
KSDRT
711
IVLTT
716
HFMDE
721
ADLLG
726
DRIAI
731
MAKGE
736
LQCCG
741
SSLFL
746
KQKYG
751
AGYHM
756
TLVKE
761
PHCNP
766
EDISQ
771
LVHHH
776
VPNAT
781
LESSA
786
GAELS
791
FILPR
796
ESTHR
801
FEGLF
806
AKLEK
811
KQKEL
816
GIASF
821
GASIT
826
TMEEV
831
FLRVG
836
KLVDS
841
SMDIQ
846
AIQLP
851
ALQYQ
856
HERRA
861
SDWAV
866
DSNLC
871
GAMDP
876
SDGIG
881
ALIEE
886
ERTAV
891
KLNTG
896
LALHC
901
QQFWA
906
MFLKK
911
AAYSW
916
REWKM
921
VAAQV
926
LVPLT
931
CVTLA
936
LLAIN
941
YSSEL
946
FDDPM
951
LRLTL
956
GEYGR
961
TVVPF
966
SVPGT
971
SQLGQ
976
QLSEH
981
LKDAL
986
QAEGQ
991
EPREV
996
LGDLE
1001
EFLIF
1006
RASVE
1011
GGGFN
1016
ERCLV
1021
AASFR
1026
DVGER
1031
TVVNA
1036
LFNNQ
1041
AYHSP
1046
ATALA
1051
VVDNL
1056
LFKLL
1061
CGPHA
1066
SIVVS
1071
NFPQP
1076
RSALQ
1081
AAKDQ
1086
FNEGR
1091
KGFDI
1096
ALNLL
1101
FAMAF
1106
LASTF
1111
SILAV
1116
SERAV
1121
QAKHV
1126
QFVSG
1131
VHVAS
1136
FWLSA
1141
LLWDL
1146
ISFLI
1151
PSLLL
1156
LVVFK
1161
AFDVR
1166
AFTRD
1171
GHMAD
1176
TLLLL
1181
LLYGW
1186
AIIPL
1191
MYLMN
1196
FFFLG
1201
AATAY
1206
TRLTI
1211
FNILS
1216
GIATF
1221
LMVTI
1226
MRIPA
1231
VKLEE
1236
LSKTL
1241
DHVFL
1246
VLPNH
1251
CLGMA
1256
VSSFY
1261
ENYET
1266
RRYCT
1271
SSEVA
1276
AHYCK
1281
KYNIQ
1286
YQENF
1291
YAWSA
1296
PGVGR
1301
FVASM
1306
AASGC
1311
AYLIL
1316
LFLIE
1321
TNLLQ
1326
RLRGI
1331
LCALR
1336
RRRTL
1341
TELYT
1346
RMPVL
1351
PEDQD
1356
VADER
1361
TRILA
1366
PSPDS
1371
LLHTP
1376
LIIKE
1381
LSKVY
1386
EQRVP
1391
LLAVD
1396
RLSLA
1401
VQKGE
1406
CFGLL
1411
GFNGA
1416
GKTTT
1421
FKMLT
1426
GEESL
1431
TSGDA
1436
FVGGH
1441
RISSD
1446
VGKVR
1451
QRIGY
1456
CPQFD
1461
ALLDH
1466
MTGRE
1471
MLVMY
1476
ARLRG
1481
IPERH
1486
IGACV
1491
ENTLR
1496
GLLLE
1501
PHANK
1506
LVRTY
1511
SGGNK
1516
RKLST
1521
GIALI
1526
GEPAV
1531
IFLDE
1536
PSTGM
1541
DPVAR
1546
RLLWD
1551
TVARA
1556
RESGK
1561
AIIIT
1566
SHSME
1571
ECEAL
1576
CTRLA
1581
IMVQG
1586
QFKCL
1591
GSPQH
1596
LKSKF
1601
GSGYS
1606
LRAKV
1611
QSEGQ
1616
QEALE
1621
EFKAF
1626
VDLTF
1631
PGSVL
1636
EDEHQ
1641
GMVHY
1646
HLPGR
1651
DLSWA
1656
KVFGI
1661
LEKAK
1666
EKYGV
1671
DDYSV
1676
SQISL
1681
EQVFL
1686
SFAHL
1691
QPPTA
1696
EEGR
1701
Mutation Information
DNA mutation:
None
Peptide Range:
415 ~ 439
Mut AA position:
427 (13 in Wild Type peptide)
Alignment
Wild Type:
"MAMGAQLIGKFEAKGMGIQWRDLLS
||||||||||||.||||||||||||
Mutant:
MAMGAQLIGKFEVKGMGIQWRDLLS"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) ABCA3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay