Immunogenicity 5235

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
KRTAP4-12
Transcript ID
NM_031854
HLA INFO
C*05:01
TCR INFO

No TCR info found!

T cell Tumor cell C*05:01
sequence
Full length protein sequence (201 aa)
MVNSC
1
CGSVC
6
SDQGC
11
GLENC
16
CRPSC
21
CQTTC
26
CRTTC
31
CRPSC
36
CVSSC
41
CRPQC
46
CQSVC
51
CQPTC
56
CRPSC
61
CQTTC
66
CRTTC
71
CRPSC
76
CVSSC
81
CRPQC
86
CQSVC
91
CQPTC
96
CRPSC
101
CQTTC
106
CRTTC
111
CRPSC
116
CVSSC
121
CRPQC
126
CQSVC
131
CQPTC
136
CRPSC
141
CISSS
146
CCPSC
151
CESSC
156
CRPCC
161
CLRPV
166
CGRVS
171
CHTTC
176
YRPTC
181
VISTC
186
PRPLC
191
CASSC
196
C
201
Mutation Information
DNA mutation:
None
Peptide Range:
65 ~ 89
Mut AA position:
77 (13 in Wild Type peptide)
Alignment
Wild Type:
"CCQTTCCRTTCCRPSCCVSSCCRPQ
||||||||||||.||||||||||||
Mutant:
CCQTTCCRTTCCHPSCCVSSCCRPQ"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) KRTAP4-12

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay