Immunogenicity 5367
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
CHD6
Transcript ID
NM_032221
HLA INFO
C*08:02
TCR INFO
No TCR info found!
Full length protein sequence (2715 aa)
MKMKI
1
QKKEK
6
QLSNL
11
KVLNH
16
SPMSD
21
ASVNF
26
DYKSP
31
SPFDC
36
STDQE
41
EKIED
46
VASHC
51
LPQKD
56
LYTAE
61
EEAAT
66
LFPRK
71
MTSHN
76
GMEDS
81
GGGGT
86
GVKKK
91
RKKKE
96
PGDQE
101
GAAKG
106
SKDRE
111
PKPKR
116
KREPK
121
EPKEP
126
RKAKE
131
PKKAK
136
EHKEP
141
KQKDG
146
AKKAR
151
KPREA
156
SGTKE
161
AKEKR
166
SCTDS
171
AARTK
176
SRKAS
181
KEQGP
186
TPVEK
191
KKKGK
196
RKSET
201
TVESL
206
ELDQG
211
LTNPS
216
LRSPE
221
ESTES
226
TDSQK
231
RRSGR
236
QVKRR
241
KYNED
246
LDFKV
251
VDDDG
256
ETIAV
261
LGAGR
266
TSALS
271
ASTLA
276
WQAEE
281
PPEDD
286
ANIIE
291
KILAS
296
KTVQE
301
VHPGE
306
PPFDL
311
ELFYV
316
KYRNF
321
SYLHC
326
KWATM
331
EELEK
336
DPRIA
341
QKIKR
346
FRNKQ
351
AQMKH
356
IFTEP
361
DEDLF
366
NPDYV
371
EVDRI
376
LEVAH
381
TKDAE
386
TGEEV
391
THYLV
396
KWCSL
401
PYEES
406
TWELE
411
EDVDP
416
AKVKE
421
FESLQ
426
VLPEI
431
KHVER
436
PASDS
441
WQKLE
446
KSREY
451
KNSNQ
456
LREYQ
461
LEGMN
466
WLLFN
471
WYNRK
476
NCILA
481
DEMGL
486
GKTIQ
491
SITFL
496
SEIFL
501
RGIHG
506
PFLII
511
APLST
516
ITNWE
521
REFRT
526
WTEMN
531
AIVYH
536
GSQIS
541
RQMIQ
546
QYEMV
551
YRDAQ
556
GNPLS
561
GVFKF
566
HVVIT
571
TFEMI
576
LADCP
581
ELKKI
586
HWSCV
591
IIDEA
596
HRLKN
601
RNCKL
606
LEGLK
611
LMALE
616
HKVLL
621
TGTPL
626
QNSVE
631
ELFSL
636
LNFLE
641
PSQFP
646
SETAF
651
LEEFG
656
DLKTE
661
EQVKK
666
LQSIL
671
KPMML
676
RRLKD
681
DVEKN
686
LAPKQ
691
ETIIE
696
VELTN
701
IQKKY
706
YRAIL
711
EKNFS
716
FLTKG
721
ANQHN
726
MPNLI
731
NTMME
736
LRKCC
741
NHPYL
746
INGAE
751
EKILE
756
DFRKT
761
HSPDA
766
PDFQL
771
QAMIQ
776
AAGKL
781
VLIDK
786
LLPKL
791
IAGGH
796
KVLIF
801
SQMVR
806
CLDIL
811
EDYLI
816
QRRYT
821
YERID
826
GRVRG
831
NLRQA
836
AIDRF
841
CKPDS
846
DRFVF
851
LLCTR
856
AGGLG
861
INLTA
866
ADTCI
871
IFDSD
876
WNPQN
881
DLQAQ
886
ARCHR
891
IGQSK
896
AVKVY
901
RLITR
906
NSYER
911
EMFDK
916
ASLKL
921
GLDKA
926
VLQDI
931
NRKGG
936
TNGVQ
941
QLSKM
946
EVEDL
951
LRKGA
956
YGALM
961
DEEDE
966
GSKFC
971
EEDID
976
QILQR
981
RTHTI
986
TIQSE
991
GKGST
996
FAKAS
1001
FVASG
1006
NRTDI
1011
SLDDP
1016
NFWQK
1021
WAKIA
1026
ELDTE
1031
AKNEK
1036
ESLVI
1041
DRPRV
1046
RKQTK
1051
HYNSF
1056
EEDEL
1061
MEFSE
1066
LDSDS
1071
DERPT
1076
RSRRL
1081
NDKAR
1086
RYLRA
1091
ECFRV
1096
EKNLL
1101
IFGWG
1106
RWKDI
1111
LTHGR
1116
FKWHL
1121
NEKDM
1126
EMICR
1131
ALLVY
1136
CVKHY
1141
KGDEK
1146
IKSFI
1151
WELIT
1156
PTKDG
1161
QAQTL
1166
QNHSG
1171
LSAPV
1176
PRGRK
1181
GKKTK
1186
NQLLI
1191
PELKD
1196
ADWLA
1201
TCNPE
1206
VVLHD
1211
DGYKK
1216
HLKQH
1221
CNKVL
1226
LRVRM
1231
LYYLK
1236
AEILG
1241
EAAEK
1246
AFEGS
1251
PAREL
1256
DVPLP
1261
DIDYM
1266
EIPVD
1271
WWDAE
1276
ADKSL
1281
LIGVF
1286
KHGYE
1291
RYNAM
1296
RADPA
1301
LCFLE
1306
KVGMP
1311
DEKSL
1316
SAEQG
1321
VTDGT
1326
SDIPE
1331
RGNTD
1336
KEDNA
1341
EDKVD
1346
GLQKQ
1351
TESSS
1356
DGGDG
1361
VFSEK
1366
KDDSR
1371
AAQDG
1376
SDPDK
1381
SPWPV
1386
SSALT
1391
ARLRR
1396
LVTVY
1401
QRCNR
1406
KELCR
1411
PEILG
1416
PGNQG
1421
YWVQE
1426
EMFRR
1431
TSEMD
1436
LINKE
1441
AQKRW
1446
TRREQ
1451
ADFYR
1456
TVSSF
1461
GVVYD
1466
QEKKT
1471
FDWTQ
1476
FRIIS
1481
RLDKK
1486
SDESL
1491
EQYFY
1496
SFVAM
1501
CRNVC
1506
RLPTW
1511
KDGGP
1516
PDTTI
1521
YVEPI
1526
TEERA
1531
ARTLY
1536
RIELL
1541
RKVRE
1546
QVLKC
1551
PQLHE
1556
RLQLC
1561
RPSLY
1566
LPVWW
1571
ECGKH
1576
DRDLL
1581
IGTAK
1586
HGLNR
1591
TDCYI
1596
MNDPQ
1601
LSFLD
1606
AYRNY
1611
AQHKR
1616
SGTQA
1621
PGNLC
1626
CLYQT
1631
NSKLY
1636
ESLTY
1641
SQMSR
1646
TSESL
1651
ENEPE
1656
NLVRV
1661
ESRDD
1666
HLSLP
1671
DVTCE
1676
NFISK
1681
VQDVI
1686
SINHD
1691
ESLLP
1696
ESLES
1701
MMYGK
1706
KVLSQ
1711
EPSSF
1716
QESPS
1721
TNTES
1726
RKDVI
1731
TISIS
1736
KDGNC
1741
QSGGP
1746
EAEIA
1751
SGPTF
1756
MGSLE
1761
AGGVA
1766
QANIK
1771
NGKHL
1776
LMSIS
1781
KEGEL
1786
CCSEA
1791
GQRPE
1796
NIGQL
1801
EAKCL
1806
ASPSL
1811
NPGNE
1816
SGFVD
1821
MCSLS
1826
VCDSK
1831
RNLSS
1836
DQQLI
1841
DLLEN
1846
KSLES
1851
KLILS
1856
QNHSD
1861
EEEEE
1866
EENEE
1871
ENLAM
1876
AVGMG
1881
ERPEV
1886
LHLTE
1891
PTTNI
1896
SREKN
1901
QGFQD
1906
ETKKG
1911
SLEVA
1916
NQTPG
1921
LQRAF
1926
PAPAA
1931
CQCHC
1936
KHMER
1941
WMHGL
1946
ENDEF
1951
EIEKP
1956
KAYIP
1961
DLFKS
1966
KTNTI
1971
AMEGE
1976
PTAIP
1981
SQPFK
1986
VKHEL
1991
LKEPW
1996
KESAE
2001
GQNVF
2006
PTYPL
2011
EGSEL
2016
KSEDM
2021
DFENK
2026
DDYDR
2031
DGNCH
2036
SQDYP
2041
GKYSE
2046
EESKS
2051
STSGI
2056
TGDIG
2061
DELQE
2066
ARAPT
2071
IAQLL
2076
QEKTL
2081
YSFSE
2086
WPKDR
2091
VIINR
2096
LDNIC
2101
HVVLK
2106
GKWPS
2111
SQQYE
2116
PSGTL
2121
PTPVL
2126
TSSAG
2131
SRTSL
2136
SEPEA
2141
AEHSF
2146
SNGAA
2151
LAAQI
2156
HKESF
2161
LAPVF
2166
TKDEQ
2171
KHRRP
2176
YEFEV
2181
ERDAK
2186
ARGLE
2191
QFSAT
2196
HGHTP
2201
IILNG
2206
WHGES
2211
AMDLS
2216
CSSEG
2221
SPGAT
2226
SPFPV
2231
SASTP
2236
KIGAI
2241
SSLQG
2246
ALGMD
2251
LSGIL
2256
QAGLI
2261
HPVTG
2266
QIVNG
2271
SLRRD
2276
DAATR
2281
RRRGR
2286
RKHVE
2291
GGMDL
2296
IFLKE
2301
QTLQA
2306
GILEV
2311
HEDPG
2316
QATLS
2321
TTHPE
2326
GPGPA
2331
TSAPE
2336
PATAA
2341
SSQAE
2346
KSIPS
2351
KSLLD
2356
WLRQQ
2361
ADYSL
2366
EVPGF
2371
GANFS
2376
DKPKQ
2381
RRPRC
2386
KEPGK
2391
LDVSS
2396
LSGEE
2401
RVPAI
2406
PKEPG
2411
LRGFL
2416
PENKF
2421
NHTLA
2426
EPILR
2431
DTGPR
2436
RRGRR
2441
PRSEL
2446
LKAPS
2451
IVADS
2456
PSGMG
2461
PLFMN
2466
GLIAG
2471
MDLVG
2476
LQNMR
2481
NMPGI
2486
PLTGL
2491
VGFPA
2496
GFATM
2501
PTGEE
2506
VKSTL
2511
SMLPM
2516
MLPGM
2521
AAVPQ
2526
MFGVG
2531
GLLSP
2536
PMATT
2541
CTSTA
2546
PASLS
2551
STTKS
2556
GTAVT
2561
EKTAE
2566
DKPSS
2571
HDVKT
2576
DTLAE
2581
DKPGP
2586
GPFSD
2591
QSEPA
2596
ITTSS
2601
PVAFN
2606
PFLIP
2611
GVSPG
2616
LIYPS
2621
MFLSP
2626
GMGMA
2631
LPAMQ
2636
QARHS
2641
EIVGL
2646
ESQKR
2651
KKKKT
2656
KGDNP
2661
NSHPE
2666
PAPSC
2671
EREPS
2676
GDENC
2681
AEPSA
2686
PLPAE
2691
REHGA
2696
QAGEG
2701
ALKDS
2706
NNDTN
2711
Mutation Information
DNA mutation:
None
Peptide Range:
1730 ~ 1754
Mut AA position:
1742 (13 in Wild Type peptide)
Alignment
Wild Type:
"SRKDVITISISKDGNCQSGGPEAEI
||||||||||||.||||||||||||
Mutant:
SRKDVITISISKHGNCQSGGPEAEI"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) CHD6
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay