Immunogenicity 5464

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CMPK1
Transcript ID
NM_016308
HLA INFO
DRB*03:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*03:01
sequence
Full length protein sequence (228 aa)
MLSRC
1
RSGLL
6
HVLGL
11
SFLLQ
16
TRRPI
21
LLCSP
26
RLMKP
31
LVVFV
36
LGGPG
41
AGKGT
46
QCARI
51
VEKYG
56
YTHLS
61
AGELL
66
RDERK
71
NPDSQ
76
YGELI
81
EKYIK
86
EGKIV
91
PVEIT
96
ISLLK
101
REMDQ
106
TMAAN
111
AQKNK
116
FLIDG
121
FPRNQ
126
DNLQG
131
WNKTM
136
DGKAD
141
VSFVL
146
FFDCN
151
NEICI
156
ERCLE
161
RGKSS
166
GRSDD
171
NRESL
176
EKRIQ
181
TYLQS
186
TKPII
191
DLYEE
196
MGKVK
201
KIDAS
206
KSVDE
211
VFDEV
216
VQIFD
221
KEG
226
Mutation Information
DNA mutation:
None
Peptide Range:
9 ~ 33
Mut AA position:
21 (13 in Wild Type peptide)
Alignment
Wild Type:
"LLHVLGLSFLLQTRRPILLCSPRLM
||||||||||||.||||||||||||
Mutant:
LLHVLGLSFLLQPRRPILLCSPRLM"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CMPK1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay