Immunogenicity 547

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
IGHV4-61
Transcript ID
ENST00000390630
HLA INFO
DQA*05:01 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*05:01 DQB*02:02
sequence
Full length protein sequence (118 aa)
MKHLW
1
FFLLL
6
VAAPR
11
WVLSQ
16
VQLQE
21
SGPGL
26
VKPSE
31
TLSLT
36
CTVSG
41
GSVSS
46
GGYYW
51
SWIRQ
56
PPGKG
61
LEWIG
66
YIYYS
71
GSTNY
76
NPSLK
81
SRVTI
86
SVDTS
91
KNQFS
96
LKLSS
101
VTAAD
106
TAVYY
111
CAR
116
Mutation Information
DNA mutation:
None
Peptide Range:
16 ~ 40
Mut AA position:
28 (13 in Wild Type peptide)
Alignment
Wild Type:
"WVLSQVQLQESGPGLVKPSETLSLT
||||||||||||.||||||||||||
Mutant:
WVLSQVQLQESGSGLVKPSETLSLT"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000211970

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay