Immunogenicity 5507

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
FAM102A
Transcript ID
NM_001035254
HLA INFO
A*29:02
TCR INFO

No TCR info found!

T cell Tumor cell A*29:02
sequence
Full length protein sequence (384 aa)
MAFLM
1
KKKKF
6
KFQTT
11
FTLEE
16
LTAVP
21
FVNGV
26
LFCKV
31
RLLDG
36
GDFVS
41
LSSRE
46
EVQEN
51
CVRWR
56
KRFTF
61
VCKMS
66
ANPAT
71
GLLDP
76
CVFRV
81
SVRKE
86
LKGGK
91
AYSKL
96
GFADL
101
NLAEF
106
AGSGS
111
TVRCC
116
LLEGY
121
DTKNT
126
RQDNS
131
ILKVT
136
IGMFL
141
LSGDP
146
CFKTP
151
PSTAK
156
SISIP
161
GQDSS
166
LQLTC
171
KGGGT
176
SSGGS
181
STNSL
186
TGSRP
191
PKARP
196
TILSS
201
GLPEE
206
PDQNL
211
SSPEE
216
VFHSG
221
HSRNS
226
SYASQ
231
QSKIS
236
GYSTE
241
HSRSS
246
SLSDL
251
THRRN
256
TSTSS
261
SASGG
266
LGMTV
271
EGPEG
276
SEREH
281
RPPEK
286
PPRPP
291
RPLHL
296
SDRSF
301
RRKKD
306
SVESH
311
PTWVD
316
DTRID
321
ADAIV
326
EKIVQ
331
SQDFT
336
DGSNT
341
EDSNL
346
RLFVS
351
RDGSA
356
TLSGI
361
QLATR
366
VSSGV
371
YEPVV
376
IESH
381
Mutation Information
DNA mutation:
None
Peptide Range:
38 ~ 62
Mut AA position:
50 (13 in Wild Type peptide)
Alignment
Wild Type:
"LDGGDFVSLSSREEVQENCVRWRKR
||||||||||||.||||||||||||
Mutant:
LDGGDFVSLSSRKEVQENCVRWRKR"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) FAM102A

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay