Immunogenicity 5693

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
HOMER3
Transcript ID
NM_004838
HLA INFO
A*32:01
TCR INFO

No TCR info found!

T cell Tumor cell A*32:01
sequence
Full length protein sequence (361 aa)
MSTAR
1
EQPIF
6
STRAH
11
VFQID
16
PATKR
21
NWIPA
26
GKHAL
31
TVSYF
36
YDATR
41
NVYRI
46
ISIGG
51
AKAII
56
NSTVT
61
PNMTF
66
TKTSQ
71
KFGQW
76
ADSRA
81
NTVYG
86
LGFAS
91
EQHLT
96
QFAEK
101
FQEVK
106
EAARL
111
AREKS
116
QDGGE
121
LTSPA
126
LGLAS
131
HQVPP
136
SPLVS
141
ANGPG
146
EEKLF
151
RSQSA
156
DAPGP
161
TERER
166
LKKML
171
SEGSV
176
GEVQW
181
EAEFF
186
ALQDS
191
NNKLA
196
GALRE
201
ANAAA
206
AQWRQ
211
QLEAQ
216
RAEAE
221
RLRQR
226
VAELE
231
AQAAS
236
EVTPT
241
GEKEG
246
LGQGQ
251
SLEQL
256
EALVQ
261
TKDQE
266
IQTLK
271
SQTGG
276
PREAL
281
EAAER
286
EETQQ
291
KVQDL
296
ETRNA
301
ELEHQ
306
LRAME
311
RSLEE
316
ARAER
321
ERARA
326
EVGRA
331
AQLLD
336
VSLFE
341
LSELR
346
EGLAR
351
LAEAA
356
P
361
Mutation Information
DNA mutation:
None
Peptide Range:
92 ~ 116
Mut AA position:
104 (13 in Wild Type peptide)
Alignment
Wild Type:
"GFASEQHLTQFAEKFQEVKEAARLA
||||||||||||.||||||||||||
Mutant:
GFASEQHLTQFAKKFQEVKEAARLA"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) HOMER3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay