Immunogenicity 589

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
GOLGA6L2
Transcript ID
ENST00000567107
HLA INFO
C*05:01
TCR INFO

No TCR info found!

T cell Tumor cell C*05:01
sequence
Full length protein sequence (909 aa)
MWPQP
1
HLPPH
6
PMMSE
11
KTRQN
16
KLAEA
21
KKKFT
26
DYRQW
31
NIAGV
36
GTRAT
41
DTKKK
46
KINNG
51
TNPET
56
TTSEG
61
CHSPE
66
DTQQN
71
RAQLK
76
EEKKA
81
SHQHQ
86
EALRR
91
EIEAQ
96
DHTIR
101
ILTCQ
106
KTELE
111
TALYY
116
SQDAA
121
RKFED
126
GNLGT
131
PSSFN
136
LALSQ
141
AFRGS
146
PLGCV
151
STSLI
156
PGESK
161
DLAGR
166
LHHSW
171
HFAGE
176
LQRAL
181
SAVST
186
WHKKA
191
DRYIE
196
ELTKE
201
RDALS
206
LELYR
211
NTITN
216
EELKK
221
KNAEL
226
QEKLR
231
LAESE
236
KSEIQ
241
LNVKE
246
LKRKL
251
ERAKF
256
LLPQV
261
QTNTL
266
QEEMW
271
RQEEE
276
LREQE
281
KKIRK
286
QEEKM
291
WRQEE
296
RLREQ
301
EGKMR
306
EQEEK
311
MRRQE
316
KRLRE
321
QEKEL
326
REQEK
331
ELREQ
336
KKLRE
341
QEEQM
346
QEQEE
351
KMWEQ
356
EEKMR
361
EQEEK
366
MWRQE
371
ERLWE
376
QEKQM
381
REQEQ
386
KMRDQ
391
EERMW
396
EQDER
401
LREKE
406
ERMRE
411
QEKMW
416
EQVEK
421
MREEK
426
KMQEQ
431
EKKTR
436
DQEEK
441
MQEEE
446
RIRER
451
EKKMR
456
EEEET
461
MREQE
466
EKMQK
471
QEENM
476
WEQEE
481
KEWQQ
486
QRLPE
491
QKEKL
496
WEQEK
501
MQEQE
506
EKIWE
511
QEEKI
516
RDQEE
521
MWGQE
526
KKMWR
531
QEKMR
536
EQEDV
541
ETGGE
546
AAGAG
551
EADVG
556
AGGED
561
AGSGA
566
EDVGP
571
GGEDV
576
GAGRE
581
AAGEG
586
GENAG
591
AEEDV
596
AAGGE
601
DAGGE
606
EDAGA
611
GEEDM
616
GPGGE
621
DARGG
626
EDAGA
631
GEEDA
636
GGGGD
641
DAGAG
646
GEDAG
651
AGRED
656
AGAGG
661
EDVGA
666
GREDA
671
GAGGE
676
DVGAG
681
GEDVG
686
AGRRR
691
CGSSR
696
GCRNR
701
RRSCG
706
NTRRC
711
RSRRS
716
GAEDV
721
GPEGE
726
DVGAG
731
REAAG
736
EGGEN
741
AGAED
746
VAAGG
751
EDAGE
756
EEDAG
761
GEDAG
766
AARED
771
AGAGG
776
DDVGA
781
GREDA
786
GAGGE
791
DVGAG
796
GEDAG
801
AGGED
806
AGAGG
811
EDAGP
816
GGEDA
821
GAGGE
826
DAGPG
831
GEDAG
836
AGGED
841
AGPGG
846
EDVGP
851
GGEDV
856
GAGGE
861
DVGAG
866
GDARE
871
GGEDT
876
RSERE
881
DAGEA
886
ARARG
891
AVLRA
896
LPPSL
901
QSSL
906
Mutation Information
DNA mutation:
None
Peptide Range:
806 ~ 830
Mut AA position:
818 (13 in Wild Type peptide)
Alignment
Wild Type:
"AGGEDAGAGGEDAGPGGEDAGAGGE
||||||||||||.||||||||||||
Mutant:
AGGEDAGAGGEDVGPGGEDAGAGGE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000174450

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay