Immunogenicity 6023
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CHST2
Transcript ID
NM_004267
HLA INFO
DRB*15:01
TCR INFO
No TCR info found!
Full length protein sequence (530 aa)
MSRSP
1
QRALP
6
PGALP
11
RLLQA
16
APAAA
21
PRALL
26
PQWPR
31
RPGRR
36
WPASP
41
LGMKV
46
FRRKA
51
LVLCA
56
GYALL
61
LVLTM
66
LNLLD
71
YKWHK
76
EPLQQ
81
CNPDG
86
PLGAA
91
AGAAG
96
GSWGR
101
PGPPP
106
AGPPR
111
AHARL
116
DLRTP
121
YRPPA
126
AAVGA
131
APAAA
136
AGMAG
141
VAAPP
146
GNGTR
151
GTGGV
156
GDKRQ
161
LVYVF
166
TTWRS
171
GSSFF
176
GELFN
181
QNPEV
186
FFLYE
191
PVWHV
196
WQKLY
201
PGDAV
206
SLQGA
211
ARDML
216
SALYR
221
CDLSV
226
FQLYS
231
PAGSG
236
GRNLT
241
TLGIF
246
GAATN
251
KVVCS
256
SPLCP
261
AYRKE
266
VVGLV
271
DDRVC
276
KKCPP
281
QRLAR
286
FEEEC
291
RKYRT
296
LVIKG
301
VRVFD
306
VAVLA
311
PLLRD
316
PALDL
321
KVIHL
326
VRDPR
331
AVASS
336
RIRSR
341
HGLIR
346
ESLQV
351
VRSRD
356
PRAHR
361
MPFLE
366
AAGHK
371
LGAKK
376
EGVGG
381
PADYH
386
ALGAM
391
EVICN
396
SMAKT
401
LQTAL
406
QPPDW
411
LQGHY
416
LVVRY
421
EDLVG
426
DPVKT
431
LRRVY
436
DFVGL
441
LVSPE
446
MEQFA
451
LNMTS
456
GSGSS
461
SKPFV
466
VSARN
471
ATQAA
476
NAWRT
481
ALTFQ
486
QIKQV
491
EEFCY
496
QPMAV
501
LGYER
506
VNSPE
511
EVKDL
516
SKTLL
521
RKPRL
526
Mutation Information
DNA mutation:
None
Peptide Range:
425 ~ 449
Mut AA position:
437 (13 in Wild Type peptide)
Alignment
Wild Type:
"YEDLVGDPVKTLRRVYDFVGLLVSP
||||||||||||.||||||||||||
Mutant:
YEDLVGDPVKTLWRVYDFVGLLVSP"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) CHST2
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay