Immunogenicity 6408

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
HIST1H2BE
Transcript ID
NM_003523
HLA INFO
DQA*05:01 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*05:01 DQB*02:02
sequence
Full length protein sequence (126 aa)
MPEPA
1
KSAPA
6
PKKGS
11
KKAVT
16
KAQKK
21
DGKKR
26
KRSRK
31
ESYSV
36
YVYKV
41
LKQVH
46
PDTGI
51
SSKAM
56
GIMNS
61
FVNDI
66
FERIA
71
GEASR
76
LAHYN
81
KRSTI
86
TSREI
91
QTAVR
96
LLLPG
101
ELAKH
106
AVSEG
111
TKAVT
116
KYTSS
121
K
126
Mutation Information
DNA mutation:
None
Peptide Range:
20 ~ 44
Mut AA position:
32 (13 in Wild Type peptide)
Alignment
Wild Type:
"TKAQKKDGKKRKRSRKESYSVYVYK
||||||||||||.||||||||||||
Mutant:
TKAQKKDGKKRKPSRKESYSVYVYK"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) HIST1H2BE

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay