Immunogenicity 6486

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
TCF19
Transcript ID
NM_007109
HLA INFO
B*13:02
TCR INFO

No TCR info found!

T cell Tumor cell B*13:02
sequence
Full length protein sequence (345 aa)
MLPCF
1
QLLRI
6
GGGRG
11
GDLYT
16
FHPPA
21
GAGCT
26
YRLGH
31
RADLC
36
DVALR
41
PQQEP
46
GLISG
51
IHAEL
56
HAEPR
61
GDDWR
66
VSLED
71
HSSQG
76
TLVNN
81
VRLPR
86
GHRLE
91
LSDGD
96
LLTFG
101
PEGPP
106
GTSPS
111
EFYFM
116
FQQVR
121
VKPQD
126
FAAIT
131
IPRSR
136
GEARV
141
GAGFR
146
PMLPS
151
QGAPQ
156
RPLST
161
FSPAP
166
KATLI
171
LNSIG
176
SLSKL
181
RPQPL
186
TFSPS
191
WGGPK
196
SLPVP
201
APPGE
206
MGTTP
211
SAPPQ
216
RNRRK
221
SVHRV
226
LAELD
231
DESEP
236
PENPP
241
PVLME
246
PRKKL
251
RVDKA
256
PLTPT
261
GNRRG
266
RPRKY
271
PVSAP
276
MAPPA
281
VGGGE
286
PCAAP
291
CCCLP
296
QEETV
301
AWVQC
306
DGCDV
311
WFHVA
316
CVGCS
321
IQAAR
326
EADFR
331
CPGCR
336
AGIQT
341
Mutation Information
DNA mutation:
None
Peptide Range:
136 ~ 160
Mut AA position:
148 (13 in Wild Type peptide)
Alignment
Wild Type:
"IPRSRGEARVGAGFRPMLPSQGAPQ
||||||||||||.||||||||||||
Mutant:
IPRSRGEARVGADFRPMLPSQGAPQ"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TCF19

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay