Immunogenicity 6626
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RNPC3
Transcript ID
NM_017619
HLA INFO
B*15:01
TCR INFO
No TCR info found!
Full length protein sequence (517 aa)
MAAPE
1
QPLAI
6
SRGCT
11
SSSSL
16
SPPRG
21
DRTLL
26
VRHLP
31
AELTA
36
EEKED
41
LLKYF
46
GAQSV
51
RVLSD
56
KGRLK
61
HTAFA
66
TFPNE
71
KAAIK
76
ALTRL
81
HQLKL
86
LGHTL
91
VVEFA
96
KEQDR
101
VHSPC
106
PTSGS
111
EKKKR
116
SDDPV
121
EDDKE
126
KKELG
131
YLTVE
136
NGIAP
141
NHGLT
146
FPLNS
151
CLKYM
156
YPPPS
161
STILA
166
NIVNA
171
LASVP
176
KFYVQ
181
VLHLM
186
NKMNL
191
PTPFG
196
PITAR
201
PPMYE
206
DYMPL
211
HAPLP
216
PTSPQ
221
PPEEP
226
PLPDE
231
DEELS
236
SEESE
241
YESTD
246
DEDRQ
251
RMNKL
256
MELAN
261
LQPKR
266
PKTIK
271
QRHVR
276
KKRKI
281
KDMLN
286
TPLCP
291
SHSSL
296
HPVLL
301
PSDVF
306
DQPQP
311
VGNKR
316
IEFHI
321
STDMP
326
AAFKK
331
DLEKE
336
QNCEE
341
KNHDL
346
PATEV
351
DASNI
356
GFGKI
361
FPKPN
366
LDITE
371
EIKED
376
SDEMP
381
SECIS
386
RRELE
391
KGRIS
396
REEME
401
TLSVF
406
RSYEP
411
GEPNC
416
RIYVK
421
NLAKH
426
VQEKD
431
LKYIF
436
GRYVD
441
FSSET
446
QRIMF
451
DIRLM
456
KEGRM
461
KGQAF
466
IGLPN
471
EKAAA
476
KALKE
481
ANGYV
486
LFGKP
491
MVVQF
496
ARSAR
501
PKQDP
506
KEGKR
511
KC
516
Mutation Information
DNA mutation:
None
Peptide Range:
454 ~ 478
Mut AA position:
466 (13 in Wild Type peptide)
Alignment
Wild Type:
"MFDIRLMKEGRMKGQAFIGLPNEKA
||||||||||||.||||||||||||
Mutant:
MFDIRLMKEGRMNGQAFIGLPNEKA"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) RNPC3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay