Immunogenicity 6646

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
FOXI1
Transcript ID
NM_144769
HLA INFO
C*05:01
TCR INFO

No TCR info found!

T cell Tumor cell C*05:01
sequence
Full length protein sequence (283 aa)
MSSFD
1
LPAPS
6
PPRCS
11
PQFPS
16
IGQEP
21
PEMNL
26
YYENF
31
FHPQG
36
VPSPQ
41
RPSFE
46
GGGEY
51
GATPN
56
PYLWF
61
NGPTM
66
TPPPY
71
LPGPN
76
ASPFL
81
PQAYG
86
VQRPL
91
LPSVS
96
GLGGS
101
DLGWL
106
PIPSQ
111
EELMK
116
LVRPP
121
YSYSA
126
LIAMA
131
IHGAP
136
DKRLT
141
LSQIY
146
QYVAD
151
NFPFY
156
NKSKA
161
GWQNS
166
IRHNL
171
SLNDC
176
FKKVP
181
RDEDD
186
PAYVS
191
GGSPT
196
SHPLV
201
TPGLS
206
PEPSD
211
KTGQN
216
SLTFN
221
SFSPL
226
TNLSN
231
HSGGG
236
DWANP
241
MPTNM
246
LSYGG
251
SVLSQ
256
FSPHF
261
YNSVN
266
TSGVL
271
YPREG
276
TEV
281
Mutation Information
DNA mutation:
None
Peptide Range:
215 ~ 239
Mut AA position:
227 (13 in Wild Type peptide)
Alignment
Wild Type:
"DKTGQNSLTFNSFSPLTNLSNHSGG
||||||||||||.||||||||||||
Mutant:
DKTGQNSLTFNSLSPLTNLSNHSGG"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) FOXI1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay