Immunogenicity 6765

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
TFAM
Transcript ID
NM_001270782
HLA INFO
DRB*15:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*15:01
sequence
Full length protein sequence (214 aa)
MAFLR
1
SMWGV
6
LSALG
11
RSGAE
16
LCTGC
21
GSRLR
26
SPFSF
31
VYLPR
36
WFSSV
41
LASCP
46
KKPVS
51
SYLRF
56
SKEQL
61
PIFKA
66
QNPDA
71
KTTEL
76
IRRIA
81
QRWRE
86
LPDSK
91
KKIYQ
96
DAYRA
101
EWQVY
106
KEEIS
111
RFKEQ
116
LTPSQ
121
IMSLE
126
KEIMD
131
KHLKR
136
KAMTK
141
KKEKL
146
KTVKE
151
NWKNL
156
SDSEK
161
ELYIQ
166
HAKED
171
ETRYH
176
NEMKS
181
WEEQM
186
IEVGR
191
KDLLR
196
RTIKK
201
QRKYG
206
AEEC
211
Mutation Information
DNA mutation:
None
Peptide Range:
100 ~ 124
Mut AA position:
112 (13 in Wild Type peptide)
Alignment
Wild Type:
"QDAYRAEWQVYKEEISRFKEQLTPS
||||||||||||.||||||||||||
Mutant:
QDAYRAEWQVYKKEISRFKEQLTPS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TFAM

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay