Immunogenicity 6843

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SURF4
Transcript ID
NM_001280790
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (226 aa)
MWFQW
1
SEQRD
6
YIDTT
11
WNCGY
16
LLASS
21
FVFLN
26
LLGQL
31
TGCVL
36
VLSRN
41
FVQYA
46
CFGLF
51
GIIAL
56
QTIAY
61
SILWD
66
LKFLM
71
RNLAL
76
GGGLL
81
LLLAE
86
SRSEG
91
KSMFA
96
GVPTM
101
RESSP
106
KQYMQ
111
LGGRV
116
LLVLM
121
FMTLL
126
HFDAS
131
FFSIV
136
QNIVG
141
TALMI
146
LVAIG
151
FKTKL
156
AALTL
161
VVWLF
166
AINVY
171
FNAFW
176
TIPVY
181
KPMHD
186
FLKYD
191
FFQTM
196
SVIGG
201
LLLVV
206
ALGPG
211
GVSMD
216
EKKKE
221
W
226
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 21
Mut AA position:
9 (9 in Wild Type peptide)
Alignment
Wild Type:
"MWFQWSEQRDYIDTTWNCGYLLASS
||||||||.||||||||||||
Mutant:
MWFQWSEQHDYIDTTWNCGYL----"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SURF4

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay