Immunogenicity 6858

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
TUBGCP3
Transcript ID
NM_001286279
HLA INFO
A*11:01
TCR INFO

No TCR info found!

T cell Tumor cell A*11:01
sequence
Full length protein sequence (439 aa)
MATPD
1
QKSPN
6
VLLQN
11
LCCRI
16
LGRSE
21
ADVAQ
26
QFQYA
31
VRVIG
36
SNFAP
41
TVERD
46
EFLVA
51
EKIKK
56
ELIRQ
61
RREAD
66
AALFS
71
ELHRK
76
LHSQG
81
VLKNK
86
WSILY
91
LLLSL
96
SEDPR
101
RQPSK
106
VSSYA
111
TLFAQ
116
ALPRD
121
AHSTP
126
YYYAR
131
PQTLP
136
LSYQD
141
RSAQS
146
AQSSG
151
SVGSS
156
GISSI
161
GLCAL
166
SGPAP
171
APQSL
176
LPGQS
181
NQAPG
186
VGDCL
191
RQQLG
196
SRLAW
201
TLTAN
206
QPSSQ
211
ATTSK
216
GVPSA
221
VSRNM
226
TRSRR
231
EGDTG
236
GTMEI
241
TEAAL
246
VRDIL
251
YVFQG
256
IDGKN
261
IKMNN
266
TENCY
271
KVEGK
276
ANLSR
281
SLRDT
286
AVRLS
291
ELGWL
296
HNKIR
301
RYTDQ
306
RSLDR
311
SFGLV
316
GQSFC
321
AALHQ
326
ELREY
331
YRLLS
336
VLHSQ
341
LQLED
346
DQGVN
351
LGLES
356
SLTLR
361
RLLVW
366
TYDPK
371
IRLKT
376
LAALV
381
DHCQG
386
PTRVF
391
PTHVF
396
PTRDF
401
PTRDF
406
PTRDF
411
PMHVF
416
PTRVF
421
PTRVW
426
HSLCF
431
RTRL
436
Mutation Information
DNA mutation:
None
Peptide Range:
391 ~ 416
Mut AA position:
403 (13 in Wild Type peptide)
Alignment
Wild Type:
"PTRVFPTHVFPTRDFPTRDFPTRDF-
||||||||||||..|||||||||||
Mutant:
PTRVFPTHVFPTHVFPTRDFPTRDFP"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TUBGCP3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay