Immunogenicity 690

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
SLC9A3R1
Transcript ID
ENST00000583369
HLA INFO
DQA*02:01 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*02:01 DQB*02:02
sequence
Full length protein sequence (215 aa)
MSADA
1
AAGAP
6
LPRLC
11
CLEKG
16
PNGYG
21
FHLHG
26
EKGKL
31
GQYIR
36
LVEPG
41
SPAEK
46
AGLLA
51
GDRLV
56
EVNGE
61
NVEKE
66
THQQV
71
VSRIR
76
AALNA
81
VRLLV
86
VDPET
91
DEQLQ
96
KLGVQ
101
VREEL
106
LRAQE
111
APGQA
116
EPPAA
121
AEVQG
126
AGNEN
131
EPREA
136
DKSHP
141
EQENS
146
REALA
151
EAALE
156
SPRPA
161
LVRSA
166
SSDTS
171
EELNS
176
QDSPP
181
KQDST
186
APSST
191
SSSDP
196
ILDFN
201
ISLAM
206
AKERA
211
Mutation Information
DNA mutation:
None
Peptide Range:
38 ~ 62
Mut AA position:
50 (13 in Wild Type peptide)
Alignment
Wild Type:
"YIRLVEPGSPAEKAGLLAGDRLVEV
||||||||||||.||||||||||||
Mutant:
YIRLVEPGSPAENAGLLAGDRLVEV"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SLC9A3R1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay