Immunogenicity 717

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CTNND1
Transcript ID
ENST00000534647
HLA INFO
DQA*02:01 / DQB*02:01
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*02:01 DQB*02:01
sequence
Full length protein sequence (261 aa)
MANGT
1
LTRRH
6
QDHSH
11
LLYST
16
IPRMQ
21
EPGQI
26
VETYT
31
EEDPE
36
GAMSV
41
VSVET
46
SDDGT
51
TRRTE
56
TTVKK
61
VVKTV
66
TTRTV
71
QPVAM
76
GPDGL
81
PVDAS
86
SVSNN
91
YIQTL
96
GRDFR
101
KNGNG
106
GPGPY
111
VGQAG
116
TATLP
121
RNFHY
126
PPDGY
131
SRHYE
136
DGYPG
141
GSDNY
146
GSLSR
151
VTRIE
156
ERYRP
161
SMEGY
166
RAPSR
171
QDVYG
176
PQPQV
181
RVGGS
186
SVDLH
191
RFHPE
196
PYGLE
201
DDQRS
206
MGYDD
211
LDYGM
216
MSDYG
221
TARRT
226
GTPSD
231
PRRRL
236
RSYED
241
MIGEE
246
VPSDQ
251
YYWAP
256
L
261
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 19
Mut AA position:
7 (7 in Wild Type peptide)
Alignment
Wild Type:
"MANGTLTRRHQDHSHLLYSTIPRMQ
||||||.||||||||||||
Mutant:
MANGTLPRRHQDHSHLLYS------"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000198561

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay