Immunogenicity 7472

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RIPOR2
Transcript ID
NM_014722
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (1068 aa)
MLVGS
1
QSFSP
6
GGPNG
11
IIRSQ
16
SFAGF
21
SGLQE
26
RRSRC
31
NSFIE
36
NSSAL
41
KKPQA
46
KLKKM
51
HNLGH
56
KNNNP
61
PKEPQ
66
PKRVE
71
EVYRA
76
LKNGL
81
DEYLE
86
VHQTE
91
LDKLT
96
AQLKD
101
MKRNS
106
RLGVL
111
YDLDK
116
QIKTI
121
ERYMR
126
RLEFH
131
ISKVD
136
ELYEA
141
YCIQR
146
RLQDG
151
ASKMK
156
QAFAT
161
SPASK
166
AARES
171
LTEIN
176
RSFKE
181
YTENM
186
CTIEV
191
ELENL
196
LGEFS
201
IKMKG
206
LAGFA
211
RLCPG
216
DQYEI
221
FMKYG
226
RQRWK
231
LKGKI
236
EVNGK
241
QSWDG
246
EETVF
251
LPLIV
256
GFISI
261
KVTEL
266
KGLAT
271
HILVG
276
SVTCE
281
TKELF
286
AARPQ
291
VVAVD
296
INDLG
301
TIKLN
306
LEITW
311
YPFDV
316
EDMTA
321
SSGAG
326
NKAAA
331
LQRRM
336
SMYSQ
341
GTPET
346
PTFKD
351
HSFFR
356
WLHPS
361
PDKPR
366
RLSVL
371
SALQD
376
TFFAK
381
LHRSR
386
SFSDL
391
PSLRP
396
SPKAV
401
LELYS
406
NLPDD
411
IFENG
416
KAAEE
421
KMPLS
426
LSFSD
431
LPNGD
436
CALTS
441
HSTGS
446
PSNST
451
NPEIT
456
ITPAE
461
FNLSS
466
LASQN
471
EGMDD
476
TSSAS
481
SRNSL
486
GEGQE
491
PKSHL
496
KEEDP
501
EEPRK
506
PASAP
511
SEACR
516
RQSSG
521
AGAEH
526
LFLEN
531
DVAEA
536
LLQES
541
EEASE
546
LKPVE
551
LDTSE
556
GNITK
561
QLVKR
566
LTSAE
571
VPMAT
576
DRLLS
581
EGSVG
586
GESEG
591
CRSFL
596
DGSLE
601
DAFNG
606
LLLAL
611
EPHKE
616
QYKEF
621
QDLNQ
626
EVMNL
631
DDILK
636
CKPAV
641
SRSRS
646
SSLSL
651
TVESA
656
LESFD
661
FLNTS
666
DFDEE
671
EDGDE
676
VCNVG
681
GGADS
686
VFSDT
691
ETEKH
696
SYRSV
701
HPEAR
706
GHLSE
711
ALTED
716
TGVGT
721
SVAGS
726
PLPLT
731
TGNES
736
LDITI
741
VRHLQ
746
YCTQL
751
VQQIV
756
FSSKT
761
PFVAR
766
SLLEK
771
LSRQI
776
QVMEK
781
LAAVS
786
DENIG
791
NISSV
796
VEAIP
801
EFHKK
806
LSLLS
811
FWTKC
816
CSPVG
821
VYHSP
826
ADRVM
831
KQLEA
836
SFART
841
VNKEY
846
PGLAD
851
PVFRT
856
LVSQI
861
LDRAE
866
PLLSS
871
SLSSE
876
VVTVF
881
QYYSY
886
FTSHG
891
VSDLE
896
SYLSQ
901
LARQV
906
SMVQT
911
LQSLR
916
DEKLL
921
QTMSD
926
LAPSN
931
LLAQQ
936
EVLRT
941
LALLL
946
TREDN
951
EVSEA
956
VTLYL
961
AAASK
966
NQHFR
971
EKALL
976
YYCEA
981
LTKTN
986
LQLQK
991
AACLA
996
LKILE
1001
ATESI
1006
KMLVT
1011
LCQSD
1016
TEEIR
1021
NVASE
1026
TLLSL
1031
GEDGR
1036
LAYEQ
1041
LDKFP
1046
RDCVK
1051
VGGRH
1056
GTEVA
1061
TAF
1066
Mutation Information
DNA mutation:
None
Peptide Range:
928 ~ 952
Mut AA position:
940 (13 in Wild Type peptide)
Alignment
Wild Type:
"MSDLAPSNLLAQQEVLRTLALLLTR
||||||||||||.||||||||||||
Mutant:
MSDLAPSNLLAQHEVLRTLALLLTR"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) FAM65B

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay