Immunogenicity 7496
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RABGGTA
Transcript ID
NM_182836
HLA INFO
B*15:01
TCR INFO
No TCR info found!
Full length protein sequence (567 aa)
MHGRL
1
KVKTS
6
EEQAE
11
AKRLE
16
REQKL
21
KLYQS
26
ATQAV
31
FQKRQ
36
AGELD
41
ESVLE
46
LTSQI
51
LGANP
56
DFATL
61
WNCRR
66
EVLQQ
71
LETQK
76
SPEEL
81
AALVK
86
AELGF
91
LESCL
96
RVNPK
101
SYGTW
106
HHRCW
111
LLGRL
116
PEPNW
121
TRELE
126
LCARF
131
LEVDE
136
RNFHC
141
WDYRR
146
FVATQ
151
AAVPP
156
AEELA
161
FTDSL
166
ITRNF
171
SNYSS
176
WHYRS
181
CLLPQ
186
LHPQP
191
DSGPQ
196
GRLPE
201
DVLLK
206
ELELV
211
QNAFF
216
TDPND
221
QSAWF
226
YHRWL
231
LGRAD
236
PQDAL
241
RCLHV
246
SRDEA
251
CLTVS
256
FSRPL
261
LVGSR
266
MEILL
271
LMVDD
276
SPLIV
281
EWRTP
286
DGRNR
291
PSHVW
296
LCDLP
301
AASLN
306
DQLPQ
311
HTFRV
316
IWTAG
321
DVQKE
326
CVLLK
331
GRQEG
336
WCRDS
341
TTDEQ
346
LFRCE
351
LSVEK
356
STVLQ
361
SELES
366
CKELQ
371
ELEPE
376
NKWCL
381
LTIIL
386
LMRAL
391
DPLLY
396
EKETL
401
QYFQT
406
LKAVD
411
PMRAT
416
YLDDL
421
RSKFL
426
LENSV
431
LKMEY
436
AEVRV
441
LHLAH
446
KDLTV
451
LCHLE
456
QLLLV
461
THLDL
466
SHNRL
471
RTLPP
476
ALAAL
481
RCLEV
486
LQASD
491
NAIES
496
LDGVT
501
NLPRL
506
QELLL
511
CNNRL
516
QQPAV
521
LQPLA
526
SCPRL
531
VLLNL
536
QGNPL
541
CQAVG
546
ILEQL
551
AELLP
556
SVSSV
561
LT
566
Mutation Information
DNA mutation:
None
Peptide Range:
298 ~ 322
Mut AA position:
310 (13 in Wild Type peptide)
Alignment
Wild Type:
"HVWLCDLPAASLNDQLPQHTFRVIW
||||||||||||.||||||||||||
Mutant:
HVWLCDLPAASLSDQLPQHTFRVIW"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) RABGGTA
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay