Immunogenicity 7598
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
PCBP1
Transcript ID
NM_006196
HLA INFO
DRB*07:01
TCR INFO
No TCR info found!
Full length protein sequence (356 aa)
MDAGV
1
TESGL
6
NVTLT
11
IRLLM
16
HGKEV
21
GSIIG
26
KKGES
31
VKRIR
36
EESGA
41
RINIS
46
EGNCP
51
ERIIT
56
LTGPT
61
NAIFK
66
AFAMI
71
IDKLE
76
EDINS
81
SMTNS
86
TAASR
91
PPVTL
96
RLVVP
101
ATQCG
106
SLIGK
111
GGCKI
116
KEIRE
121
STGAQ
126
VQVAG
131
DMLPN
136
STERA
141
ITIAG
146
VPQSV
151
TECVK
156
QICLV
161
MLETL
166
SQSPQ
171
GRVMT
176
IPYQP
181
MPASS
186
PVICA
191
GGQDR
196
CSDAA
201
GYPHA
206
THDLE
211
GPPLD
216
AYSIQ
221
GQHTI
226
SPLDL
231
AKLNQ
236
VARQQ
241
SHFAM
246
MHGGT
251
GFAGI
256
DSSSP
261
EVKGY
266
WASLD
271
ASTQT
276
THELT
281
IPNNL
286
IGCII
291
GRQGA
296
NINEI
301
RQMSG
306
AQIKI
311
ANPVE
316
GSSGR
321
QVTIT
326
GSAAS
331
ISLAQ
336
YLINA
341
RLSSE
346
KGMGC
351
S
356
Mutation Information
DNA mutation:
None
Peptide Range:
88 ~ 112
Mut AA position:
100 (13 in Wild Type peptide)
Alignment
Wild Type:
"TNSTAASRPPVTLRLVVPATQCGSL
||||||||||||.||||||||||||
Mutant:
TNSTAASRPPVTQRLVVPATQCGSL"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) PCBP1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay