Immunogenicity 7616

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
BIRC8
Transcript ID
NM_033341
HLA INFO
DRB*03:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*03:01
sequence
Full length protein sequence (236 aa)
MTGYE
1
ARLIT
6
FGTWM
11
YSVNK
16
EQLAR
21
AGFYA
26
IGQED
31
KVQCF
36
HCGGG
41
LANWK
46
PKEDP
51
WEQHA
56
KWYPG
61
CKYLL
66
EEKGH
71
EYINN
76
IHLTR
81
SLEGA
86
LVQTT
91
KKTPS
96
LTKRI
101
SDTIF
106
PNPML
111
QEAIR
116
MGFDF
121
KDVKK
126
IMEER
131
IQTSG
136
SNYKT
141
LEVLV
146
ADLVS
151
AQKDT
156
TENEL
161
NQTSL
166
QREIS
171
PEEPL
176
RRLQE
181
EKLCK
186
ICMDR
191
HIAVV
196
FIPCG
201
HLVTC
206
KQCAE
211
AVDRC
216
PMCSA
221
VIDFK
226
QRVFM
231
S
236
Mutation Information
DNA mutation:
None
Peptide Range:
66 ~ 90
Mut AA position:
78 (13 in Wild Type peptide)
Alignment
Wild Type:
"CKYLLEEKGHEYINNIHLTRSLEGA
||||||||||||.||||||||||||
Mutant:
CKYLLEEKGHEYTNNIHLTRSLEGA"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) BIRC8

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay