Immunogenicity 7623
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
RBM28
Transcript ID
NM_001166135
HLA INFO
DRB*15:01
TCR INFO
No TCR info found!
Full length protein sequence (618 aa)
MAGLT
1
LFVGR
6
LPPSA
11
RSEQL
16
EELFS
21
QVGPV
26
KQCFV
31
VTEKG
36
RTVAV
41
DWAVA
46
KDKYK
51
DTQSV
56
SAIGE
61
EKSHE
66
SKHQE
71
SVKKK
76
GREEE
81
DMEEE
86
ENDDD
91
DDDDD
96
EEDGV
101
FDDED
106
EEEEN
111
IESKV
116
TKPVQ
121
IQKRA
126
VKRPA
131
PAKSS
136
DHSEE
141
DSDLE
146
ESDSI
151
DDGEE
156
LAQSD
161
TSTEE
166
QEDKA
171
VQVSN
176
KKKRK
181
LPSDV
186
NEGKT
191
VFIRN
196
LSFDS
201
EEEEL
206
GELLQ
211
QFGEL
216
KYVRI
221
VLHPD
226
TEHSK
231
GCAFA
236
QFMTQ
241
EAAQK
246
CLLAA
251
SPENE
256
AGGLK
261
LDGRQ
266
LKVDL
271
AVTRD
276
EAAKL
281
QTTKV
286
KKPTG
291
TRNLY
296
LAREG
301
LIRAG
306
TKAAE
311
GVSAA
316
DMAKR
321
ERFEL
326
LKHQK
331
LKDQN
336
IFVSR
341
TRLCL
346
HNLPK
351
AVDDK
356
QLRKL
361
LLSAT
366
SGEKG
371
VRIKE
376
CRVMR
381
DLKGV
386
HGNMK
391
GQSLG
396
YAFAE
401
FQEHE
406
HALKA
411
LRLIN
416
NNPEI
421
FGPLK
426
RPIVE
431
FSLED
436
RRKLK
441
MKELR
446
IQRSL
451
QKMRS
456
KPATG
461
EPQKG
466
QPEPA
471
KDQQQ
476
KAAQH
481
HTEEQ
486
SKVPP
491
EQKRK
496
AGSTS
501
WTGFQ
506
TKAEV
511
EQVEL
516
PDGKK
521
RRKVL
526
ALPSH
531
RGPKI
536
RLRDK
541
GKVKP
546
VHPKK
551
PKPQI
556
NQWKQ
561
EKQQL
566
SSEQV
571
SRKKA
576
KGNKT
581
ETRFN
586
QLVEQ
591
YKQKL
596
LGPSK
601
GAPLA
606
KRSKW
611
FDS
616
Mutation Information
DNA mutation:
None
Peptide Range:
364 ~ 388
Mut AA position:
376 (13 in Wild Type peptide)
Alignment
Wild Type:
"KLLLSATSGEKGVRIKECRVMRDLK
||||||||||||.||||||||||||
Mutant:
KLLLSATSGEKGLRIKECRVMRDLK"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) RBM28
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay