Immunogenicity 821

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
SNTG2
Transcript ID
ENST00000308624
HLA INFO
DQA*02:01 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*02:01 DQB*02:02
sequence
Full length protein sequence (539 aa)
MGTEG
1
PPPPA
6
ASRGR
11
QGCLL
16
VPART
21
KTTIA
26
LLYDE
31
ESENA
36
YDIRL
41
KLTKE
46
VLTIQ
51
KQDVV
56
CVGGS
61
HQGRN
66
RRTVT
71
LRRQP
76
VGGLG
81
LSIKG
86
GSEHN
91
VPVVI
96
SKIFE
101
DQAAD
106
QTGML
111
FVGDA
116
VLQVN
121
GIHVE
126
NATHE
131
EVVHL
136
LRNAG
141
DEVTI
146
TVEYL
151
REAPA
156
FLKLP
161
LGSPG
166
PSSDH
171
SSGAS
176
SPLFD
181
SGLHL
186
NGNSS
191
TTAPS
196
SPSSP
201
IAKDP
206
RYEKR
211
WLDTL
216
SVPLS
221
MARIS
226
RYKAG
231
TEKLR
236
WNAFE
241
VLALD
246
GVSSG
251
ILRFY
256
TAQDG
261
TDWLR
266
AVSAN
271
IRELT
276
LQNMK
281
MANKC
286
CSPSD
291
QVVHM
296
GWVNE
301
KLQGA
306
DSSQT
311
FRPKF
316
LALKG
321
PSFYV
326
FSTPP
331
VSTFD
336
WVRAE
341
RTYHL
346
CEVLF
351
KVHKF
356
WLTED
361
CWLQA
366
NLYLG
371
LQDFD
376
FEDQR
381
PYCFS
386
IVAGH
391
GKSHV
396
FNVEL
401
GSELA
406
MWEKS
411
FQRAT
416
FMEVQ
421
RTGSR
426
TYMCS
431
WQGEM
436
LCFTV
441
DFALG
446
FTCFE
451
SKTKN
456
VLWRF
461
KFSQL
466
KGSSD
471
DGKTR
476
VKLLF
481
QNLDT
486
KQIET
491
KELEF
496
QDLRA
501
VLHCI
506
HSFIA
511
AKVAS
516
VDPGF
521
MDSQS
526
LARKY
531
MYSS
536
Mutation Information
DNA mutation:
None
Peptide Range:
380 ~ 404
Mut AA position:
392 (13 in Wild Type peptide)
Alignment
Wild Type:
"DFEDQRPYCFSIVAGHGKSHVFNVE
||||||||||||.||||||||||||
Mutant:
DFEDQRPYCFSIMAGHGKSHVFNVE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SNTG2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay