Immunogenicity 8550

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
TMPRSS4
Transcript ID
NM_032405
HLA INFO
A*30:02
TCR INFO

No TCR info found!

T cell Tumor cell A*30:02
sequence
Full length protein sequence (344 aa)
MGEND
1
PPAVE
6
APFSF
11
RSLFG
16
LDDLK
21
ISPVA
26
PDADA
31
VAAQI
36
LSLLP
41
LKFFP
46
IIVIG
51
IIALI
56
LALAI
61
GLGIH
66
FDCSG
71
KYRCR
76
SSFKC
81
IELIA
86
RCDGV
91
SDCKD
96
GEDEY
101
RCVRV
106
GGQNA
111
VLQVF
116
TAASW
121
KTMCS
126
DDWKG
131
HYANV
136
ACAQL
141
GFPSY
146
VSSDN
151
LRVSS
156
LEGQF
161
REEFV
166
SIDHL
171
LPDDK
176
VTALH
181
HSVYV
186
REGCA
191
SGHVV
196
TLQCT
201
ACGHR
206
RGYSS
211
RIVGG
216
NMSLL
221
SQWPW
226
QASLQ
231
FQGYH
236
LCGGS
241
VITPL
246
WIITA
251
AHCVY
256
DLYLP
261
KSWTI
266
QVGLV
271
SLLDN
276
PAPSH
281
LVEKI
286
VYHSK
291
YKPKR
296
LGNDI
301
ALMKL
306
AGPLT
311
FNGTS
316
GSLCG
321
SAALP
326
LFQED
331
LQLLI
336
EAFL
341
Mutation Information
DNA mutation:
None
Peptide Range:
291 ~ 315
Mut AA position:
303 (13 in Wild Type peptide)
Alignment
Wild Type:
"VYHSKYKPKRLGNDIALMKLAGPLT
||||||||||||.||||||||||||
Mutant:
VYHSKYKPKRLGYDIALMKLAGPLT"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TMPRSS3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay