Immunogenicity 8560
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
PCDH19
Transcript ID
NM_001184880
HLA INFO
A*30:02
TCR INFO
No TCR info found!
Full length protein sequence (1148 aa)
MESLL
1
LPVLL
6
LLAIL
11
WTQAA
16
ALINL
21
KYSVE
26
EEQRA
31
GTVIA
36
NVAKD
41
AREAG
46
FALDP
51
RQASA
56
FRVVS
61
NSAPH
66
LVDIN
71
PSSGL
76
LVTKQ
81
KIDRD
86
LLCRQ
91
SPKCI
96
ISLEV
101
MSSSM
106
EICVI
111
KVEIK
116
DLNDN
121
APSFP
126
AAQIE
131
LEISE
136
AASPG
141
TRIPL
146
DSAYD
151
PDSGS
156
FGVQT
161
YELTP
166
NELFG
171
LEIKT
176
RGDGS
181
RFAEL
186
VVEKS
191
LDRET
196
QSHYS
201
FRITA
206
LDGGD
211
PPRLG
216
TVGLS
221
IKVTD
226
SNDNN
231
PVFSE
236
STYAV
241
SVPEN
246
SPPNT
251
PVIRL
256
NASDP
261
DEGTN
266
GQVVY
271
SFYGY
276
VNDRT
281
RELFQ
286
IDPHS
291
GLVTV
296
TGALD
301
YEEGH
306
VYELD
311
VQAKD
316
LGPNS
321
IPAHC
326
KVTVS
331
VLDTN
336
DNPPV
341
INLLS
346
VNSEL
351
VEVSE
356
SAPPG
361
YVIAL
366
VRVSD
371
RDSGL
376
NGRVQ
381
CRLLG
386
NVPFR
391
LQEYE
396
SFSTI
401
LVDGR
406
LDREQ
411
HDQYN
416
LTIQA
421
RDGGV
426
PMLQS
431
AKSFT
436
VLITD
441
ENDNH
446
PHFSK
451
PYYQV
456
IVQEN
461
NTPGA
466
YLLSV
471
SARDP
476
DLGLN
481
GSVSY
486
QIVPS
491
QVRDM
496
PVFTY
501
VSINP
506
NSGDI
511
YALRS
516
FNHEQ
521
TKAFE
526
FKVLA
531
KDGGL
536
PSLQS
541
NATVR
546
VIILD
551
VNDNT
556
PVITA
561
PPLIN
566
GTAEV
571
YIPRN
576
SGIGY
581
LVTVV
586
KAEDY
591
DEGEN
596
GRVTY
601
DMTEG
606
DRGFF
611
EIDQV
616
NGEVR
621
TTRTF
626
GESSK
631
SSYEL
636
IVVAH
641
DHGKT
646
SLSAS
651
ALVLI
656
YLSPA
661
LDAQE
666
SMGSV
671
NLSLI
676
FIIAL
681
GSIAG
686
ILFVT
691
MIFVA
696
IKCKR
701
DNKEI
706
RTYNC
711
SNCLT
716
ITCLL
721
GCFIK
726
GQNSK
731
CLHCI
736
SVSPI
741
SEEQD
746
KKTEE
751
KVSLR
756
GKRIA
761
EYSYG
766
HQKKS
771
SKKKK
776
ISKND
781
IRLVP
786
RDVEE
791
TDKMN
796
VVSCS
801
SLTSS
806
LNYFD
811
YHQQT
816
LPLGC
821
RRSES
826
TFLNV
831
ENQNT
836
RNTSA
841
NHIYH
846
HSFNS
851
QGPQQ
856
PDLII
861
NGVPL
866
PETEN
871
YSFDS
876
NYVNS
881
RAHLI
886
KSSST
891
FKDLE
896
GNSLK
901
DSGHE
906
ESDQT
911
DSEHD
916
VQRSL
921
YCDTA
926
VNDVL
931
NTSVT
936
SMGSQ
941
MPDHD
946
QNEGF
951
HCREE
956
CRILG
961
HSDRC
966
WMPRN
971
PMPIR
976
SKSPE
981
HVRNI
986
IALSI
991
EATAA
996
DVEAY
1001
DDCGP
1006
TKRTF
1011
ATFGK
1016
DVSDH
1021
PAEER
1026
PTLKG
1031
KRTVD
1036
VTICS
1041
PKVNS
1046
VIREA
1051
GNGCE
1056
AISPV
1061
TSPLH
1066
LKSSL
1071
PTKPS
1076
VSYTI
1081
ALAPP
1086
ARDLE
1091
QYVNN
1096
VNNGP
1101
TRPSE
1106
AEPRG
1111
ADSEK
1116
VMHEV
1121
SPILK
1126
EGRNK
1131
ESPGV
1136
KRLKD
1141
IVL
1146
Mutation Information
DNA mutation:
None
Peptide Range:
815 ~ 839
Mut AA position:
827 (13 in Wild Type peptide)
Alignment
Wild Type:
"DYHQQTLPLGCRRSESTFLNVENQN
||||||||||||.||||||||||||
Mutant:
DYHQQTLPLGCRHSESTFLNVENQN"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) PCDH19
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay