Immunogenicity 8687

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
C1QTNF5
Transcript ID
NM_001278431
HLA INFO
B*40:01
TCR INFO

No TCR info found!

T cell Tumor cell B*40:01
sequence
Full length protein sequence (243 aa)
MRPLL
1
VLLLL
6
GLAAG
11
SPPLD
16
DNKIP
21
SLCPG
26
HPGLP
31
GTPGH
36
HGSQG
41
LPGRD
46
GRDGR
51
DGAPG
56
APGEK
61
GEGGR
66
PGLPG
71
PRGDP
76
GPRGE
81
AGPAG
86
PTGPA
91
GECSV
96
PPRSA
101
FSAKR
106
SESRV
111
PPPSD
116
APLPF
121
DRVLV
126
NEQGH
131
YDAVT
136
GKFTC
141
QVPGV
146
YYFAV
151
HATVY
156
RASLQ
161
FDLVK
166
NGESI
171
ASFFQ
176
FFGGW
181
PKPAS
186
LSGGA
191
MVRLE
196
PEDQV
201
WVQVG
206
VGDYI
211
GIYAS
216
IKTDS
221
TFSGF
226
LVYSD
231
WHSSP
236
VFA
241
Mutation Information
DNA mutation:
None
Peptide Range:
77 ~ 101
Mut AA position:
89 (13 in Wild Type peptide)
Alignment
Wild Type:
"RGDPGPRGEAGPAGPTGPAGECSVP
||||||||||||.||||||||||||
Mutant:
RGDPGPRGEAGPPGPTGPAGECSVP"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) C1QTNF5

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay