Immunogenicity 8787

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
RFPL4AL1
Transcript ID
NM_001277397
HLA INFO
C*03:04
TCR INFO

No TCR info found!

T cell Tumor cell C*03:04
sequence
Full length protein sequence (287 aa)
MAEHF
1
KQIIR
6
CPVCL
11
KDLEE
16
AVQLK
21
CGYAC
26
CLQCL
31
NSLQK
36
EPDGE
41
GLLCR
46
FCSVV
51
SQKDD
56
IKPKY
61
KLRAL
66
VSIIK
71
ELEPK
76
LKSVL
81
TMNPR
86
MRKFQ
91
VDMTF
96
DVDTA
101
NNYLI
106
ISEDL
111
RSFRS
116
GDLSQ
121
NRKEQ
126
AERFD
131
TALCV
136
LGTPR
141
FTSGR
146
HYWEV
151
DVGTS
156
QVWDV
161
GVCKE
166
SVNRQ
171
GKIEL
176
SSEHG
181
FLTVG
186
CREGK
191
VFAAS
196
TVPMT
201
PLWVS
206
PQLHR
211
VGIFL
216
DVGMR
221
SIAFY
226
NVSDG
231
CHINT
236
FIEIP
241
VCEPW
246
RPFFA
251
HKRGS
256
QDDQS
261
ILSIC
266
SVINP
271
STASA
276
PVSSE
281
GK
286
Mutation Information
DNA mutation:
None
Peptide Range:
265 ~ 287
Mut AA position:
277 (13 in Wild Type peptide)
Alignment
Wild Type:
"SILSICSVINPSTASAPVSSEGK
||||||||||||.||||||||||
Mutant:
SILSICSVINPSAASAPVSSEGK"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) RFPL4AL1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay