Immunogenicity 8789
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
RTL1
Transcript ID
NM_001134888
HLA INFO
A*03:01
TCR INFO
No TCR info found!
Full length protein sequence (1358 aa)
MIEPS
1
EDSFE
6
TMMEH
11
KNPSS
16
KQMES
21
SEGSS
26
NTTEA
31
TSGSG
36
VRGEA
41
GPASG
46
PAQEK
51
KEPPS
56
GPLQE
61
MEELP
66
TDLLQ
71
DMEEP
76
SSGPR
81
KEIED
86
PPNDL
91
LQDLE
96
ESCNG
101
SHQAR
106
GDPLS
111
GASDR
116
MKEAS
121
VNPSG
126
AREEQ
131
EAHTD
136
LKESG
141
REETP
146
QEQNQ
151
TEHST
156
AELMA
161
MVRSI
166
ISLYF
171
RMQDL
176
KEQQR
181
VAEEI
186
LIKGI
191
NAGQL
196
PAPKH
201
FSGDR
206
REFHE
211
FIVLC
216
QLTLQ
221
SYPRM
226
FYNDR
231
LRVGY
236
VINHL
241
SGLAL
246
EWAKA
251
LLQEN
256
SPLIG
261
DFPAF
266
LEAMS
271
EVFEY
276
RQALR
281
VAEEA
286
MFTIR
291
QGGRS
296
ATEYI
301
DEFQS
306
LVPIL
311
GWPDE
316
VLQAH
321
LCQGL
326
NEEIR
331
HYLFR
336
VPQPD
341
SLDSL
346
IVLIL
351
QIEEK
356
LAERR
361
AMLRL
366
PPEAR
371
PRNLT
376
WIDSP
381
APERW
386
MVSSW
391
LPSEV
396
HPDIN
401
RAHLF
406
LLLMV
411
RVNPY
416
HSVAV
421
QALVD
426
SGADG
431
NFMDE
436
KFAQE
441
HYVEL
446
YEKPY
451
PQPVQ
456
SVDGS
461
LIGNE
466
PVWLY
471
TEPLV
476
CIHQN
481
HQESI
486
EFDIV
491
PSPNF
496
SVVLG
501
IRWLR
506
VHAPE
511
VDWIK
516
GRCTF
521
HSPYC
526
LKNCF
531
RPPPP
536
CIALE
541
RHGMS
546
LLPGL
551
PHPYS
556
DLADV
561
FNPKE
566
ADDET
571
SDQPS
576
SDGSD
581
DLSES
586
EPSEL
591
QQAGD
596
SDHSE
601
TFYEC
606
PSTAP
611
WEPVG
616
ARMQE
621
RARLQ
626
EEYWD
631
LQDML
636
TNRQD
641
YIQMI
646
PELFD
651
QLHGA
656
EWFTK
661
LELRG
666
TIVEE
671
SVNGH
676
RTEDV
681
WKAAF
686
GLELE
691
EMKSY
696
QPFAL
701
SPDPI
706
IPQNV
711
IHFIL
716
KDMLG
721
FFVLS
726
YGQEV
731
LIYSM
736
SQEEH
741
LHHVR
746
QVLVR
751
FRHHN
756
VYCSL
761
DKSQF
766
HRQTV
771
EFLGF
776
VVTPK
781
GVKLN
786
KNVMT
791
IITGY
796
PTPGS
801
KLSLR
806
NFIEF
811
VFPYR
816
HFVER
821
FSIIA
826
EPLVR
831
QLLSS
836
YQFYW
841
GVEEQ
846
EAFEC
851
LKRAF
856
RKAPL
861
LHHPK
866
PQNPF
871
YLETG
876
VTGTA
881
LHASL
886
IQIDD
891
QTGKR
896
ACCAF
901
YSRNI
906
SPIEV
911
EYSQA
916
EMKIL
921
PIRAA
926
FMVWC
931
RYLEN
936
TEEPI
941
MILLN
946
TEDLA
951
SLNND
956
RLTVL
961
LPGHW
966
VFFFS
971
HFNFD
976
VMELP
981
EQDGG
986
RALPP
991
VRNLR
996
WRRAF
1001
QRNTA
1006
ARQTL
1011
LLASR
1016
GFPRD
1021
PSTES
1026
GEEEN
1031
EEQDE
1036
LNEQI
1041
LRQEL
1046
LAMIP
1051
IDQIL
1056
NSFLA
1061
HFSMA
1066
QIRAV
1071
ILHFF
1076
RGLLY
1081
WKNTL
1086
ALAAI
1091
LVLLR
1096
VRQCL
1101
SLRPA
1106
PAMRV
1111
ARPQP
1116
QRSLR
1121
LILDS
1126
SLIAG
1131
SSITT
1136
AITQL
1141
LTQMP
1146
ALVGA
1151
NTIPA
1156
QELAE
1161
LFLGP
1166
GRWQR
1171
NALHS
1176
QAHRG
1181
LQFTP
1186
GFWLT
1191
LCEFF
1196
GVRVT
1201
PQEGH
1206
LPALR
1211
QNRYL
1216
ELHVV
1221
GDEDV
1226
VLREA
1231
LQDDL
1236
QRYRQ
1241
CGLHD
1246
GLQDT
1251
SQDKQ
1256
DNDVQ
1261
EAPPS
1266
HTAAT
1271
HPPRP
1276
RHLMD
1281
PQVLE
1286
FLGSR
1291
LLHIH
1296
SADGQ
1301
LHLLS
1306
REQAA
1311
RALSQ
1316
FLTLI
1321
YRRAL
1326
PIPAW
1331
ESQPR
1336
EQARL
1341
EELPD
1346
EDEDA
1351
NLD
1356
Mutation Information
DNA mutation:
None
Peptide Range:
1318 ~ 1342
Mut AA position:
1330 (13 in Wild Type peptide)
Alignment
Wild Type:
"LSQFLTLIYRRALPIPAWESQPREQ
||||||||||||.||||||||||||
Mutant:
LSQFLTLIYRRAPPIPAWESQPREQ"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) RTL1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay