Immunogenicity 9249

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SLC35G4
Transcript ID
NM_001282300
HLA INFO
A*03:01
TCR INFO

No TCR info found!

T cell Tumor cell A*03:01
sequence
Full length protein sequence (338 aa)
MAGSH
1
PYFNL
6
PDSTH
11
PSPPS
16
TPPSL
21
HWHQR
26
CQPSD
31
ATNGL
36
LVALL
41
GGGLP
46
AGFVG
51
PLSRM
56
AYQAS
61
NLPSL
66
ELVIC
71
RCLFH
76
LPIAL
81
LLKLR
86
GDPLL
91
GPPDI
96
RGRTC
101
FCALL
106
NVLNI
111
GCAYS
116
AVQVV
121
PTGNA
126
ATVRK
131
HSSTV
136
CSAIL
141
TLCLE
146
SQVLS
151
GYDWC
156
GLLGS
161
ILGLI
166
IIVGP
171
GLWTL
176
QEGTT
181
GVYTG
186
LGYVQ
191
AFLGG
196
LALSL
201
GLLVY
206
RSLHF
211
PSCLP
216
TVAFL
221
SGLVG
226
LLGSV
231
PGLFV
236
LQSPV
241
LPSDL
246
LSWSC
251
VGAVG
256
ILTLV
261
SFTCV
266
GYAVT
271
KAHPA
276
LVCAV
281
LHSEV
286
VMALI
291
LQYFM
296
LHETV
301
APSDI
306
MGAGV
311
VLGSI
316
AIITA
321
RNLIC
326
ERTGK
331
VEE
336
Mutation Information
DNA mutation:
None
Peptide Range:
234 ~ 264
Mut AA position:
246 (13 in Wild Type peptide)
Alignment
Wild Type:
"SVPGLFVLQSPVLPSDLLSWSCVGA------
||||||||||||.|||||.||||||
Mutant:
SVPGLFVLQSPVFPSDLLNWSCVGAVGILTL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SLC35G4

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay