Immunogenicity 9408
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
LRRC4C
Transcript ID
NM_001258419
HLA INFO
C*07:02
TCR INFO
No TCR info found!
Full length protein sequence (640 aa)
MLNKM
1
TLHPQ
6
QIMIG
11
PRFNR
16
ALFDP
21
LLVVL
26
LALQL
31
LVVAG
36
LVRAQ
41
TCPSV
46
CSCSN
51
QFSKV
56
ICVRK
61
NLREV
66
PDGIS
71
TNTRL
76
LNLHE
81
NQIQI
86
IKVNS
91
FKHLR
96
HLEIL
101
QLSRN
106
HIRTI
111
EIGAF
116
NGLAN
121
LNTLE
126
LFDNR
131
LTTIP
136
NGAFV
141
YLSKL
146
KELWL
151
RNNPI
156
ESIPS
161
YAFNR
166
IPSLR
171
RLDLG
176
ELKRL
181
SYISE
186
GAFEG
191
LSNLR
196
YLNLA
201
MCNLR
206
EIPNL
211
TPLIK
216
LDELD
221
LSGNH
226
LSAIR
231
PGSFQ
236
GLMHL
241
QKLWM
246
IQSQI
251
QVIER
256
NAFDN
261
LQSLV
266
EINLA
271
HNNLT
276
LLPHD
281
LFTPL
286
HHLER
291
IHLHH
296
NPWNC
301
NCDIL
306
WLSWW
311
IKDMA
316
PSNTA
321
CCARC
326
NTPPN
331
LKGRY
336
IGELD
341
QNYFT
346
CYAPV
351
IVEPP
356
ADLNV
361
TEGMA
366
AELKC
371
RASTS
376
LTSVS
381
WITPN
386
GTVMT
391
HGAYK
396
VRIAV
401
LSDGT
406
LNFTN
411
VTVQD
416
TGMYT
421
CMVSN
426
SVGNT
431
TASAT
436
LNVTA
441
ATTTP
446
FSYFS
451
TVTVE
456
TMEPS
461
QDEAR
466
TTDNN
471
VGPTP
476
VVDWE
481
TTNVT
486
TSLTP
491
QSTRS
496
TEKTF
501
TIPVT
506
DINSG
511
IPGID
516
EVMKT
521
TKIII
526
GCFVA
531
ITLMA
536
AVMLV
541
IFYKM
546
RKQHH
551
RQNHH
556
APTRT
561
VEIIN
566
VDDEI
571
TGDTP
576
MESHL
581
PMPAI
586
EHEHL
591
NHYNS
596
YKSPF
601
NHTTT
606
VNTIN
611
SIHSS
616
VHEPL
621
LIRMN
626
SKDNV
631
QETQI
636
Mutation Information
DNA mutation:
None
Peptide Range:
471 ~ 495
Mut AA position:
483 (13 in Wild Type peptide)
Alignment
Wild Type:
"TTDNNVGPTPVVDWETTNVTTSLTP
||||||||||||.||||||||||||
Mutant:
TTDNNVGPTPVVYWETTNVTTSLTP"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) LRRC4C
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay