Immunogenicity 9709

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
CCNC
Transcript ID
ENST00000486428
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (228 aa)
LKLRQ
1
QVIAT
6
ATVYF
11
KRFYA
16
RYSLK
21
SIDPV
26
LMAPT
31
CVFLA
36
SKVEE
41
FGVVS
46
NTRLI
51
AAATS
56
VLKTR
61
FSYAF
66
PKEFP
71
YRMNH
76
ILECE
81
FYLLE
86
LMDCC
91
LIVYH
96
PYRPL
101
LQYVQ
106
DMGQE
111
DMLLP
116
LAWRI
121
VNDTY
126
RTDLC
131
LLYPP
136
FMIAL
141
ACLHV
146
ACVVQ
151
QKDAR
156
QWFAE
161
LSVDM
166
EKILE
171
IIRVI
176
LKLYE
181
QWKNF
186
DERKE
191
MATIL
196
SKMPK
201
PKPPP
206
NRNSL
211
SDSPL
216
VAGPE
221
AAR
226
Mutation Information
DNA mutation:
None
Peptide Range:
209 ~ 228
Mut AA position:
221 (13 in Wild Type peptide)
Alignment
Wild Type:
"PPNRNSLSDSPLVAGPEAAR
||||||||||||.|||||||
Mutant:
PPNRNSLSDSPLMAGPEAAR"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CCNC

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay