Immunogenicity 9717

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
SYNPR
Transcript ID
ENST00000295894
HLA INFO
B*35:03
TCR INFO

No TCR info found!

T cell Tumor cell B*35:03
sequence
Full length protein sequence (265 aa)
MCMVI
1
FAPLF
6
AIFAF
11
ATCGG
16
YSGGL
21
RLSVD
26
CVNKT
31
ESNLS
36
IDIAF
41
AYPFR
46
LHQVT
51
FEVPT
56
CEGKE
61
RQKLA
66
LIGDS
71
SSSAE
76
FFVTV
81
AVFAF
86
LYSLA
91
ATVVY
96
IFFQN
101
KYREN
106
NRGPL
111
IDFIV
116
TVVFS
121
FLWLV
126
GSSAW
131
AKGLS
136
DVKVA
141
TDPKE
146
VLLLM
151
SACKQ
156
PSNKC
161
MAIHS
166
PVMSS
171
LNTSV
176
VFGFL
181
NFILW
186
AGNIW
191
FVFKE
196
TGWHS
201
SGQRY
206
LSDPM
211
EKHSS
216
SYNQG
221
GYNQD
226
SYGSS
231
SGYSQ
236
QASLG
241
PTSDE
246
FGQQP
251
TGPTS
256
FTNQI
261
Mutation Information
DNA mutation:
None
Peptide Range:
149 ~ 173
Mut AA position:
161 (13 in Wild Type peptide)
Alignment
Wild Type:
"KEVLLLMSACKQPSNKCMAIHSPVM
||||||||||||.||||||||||||
Mutant:
KEVLLLMSACKQLSNKCMAIHSPVM"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SYNPR

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay