Immunogenicity 9775

summary
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
TEX38
Transcript ID
ENST00000569393
HLA INFO
DQA*01:03 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*02:02
sequence
Full length protein sequence (260 aa)
MPNSQ
1
NPVTS
6
PLENK
11
GPGHS
16
GDSDW
21
LGRWA
26
DWLGR
31
WVGEF
36
PLPRA
41
IGQVP
46
KLSCM
51
DSQQE
56
DLRFP
61
GMWVS
66
LYFGI
71
LGLCS
76
VITGG
81
CIIFL
86
HWRKN
91
LRREE
96
HAQQW
101
VEVMR
106
AATFT
111
YSPLL
116
YWINK
121
RRRYG
126
MNAAI
131
NTGPA
136
PAVTK
141
TETEV
146
QNPDV
151
LWDLD
156
IPEGR
161
SHADQ
166
DSNPK
171
AEAPA
176
PLQPA
181
LQLAP
186
QQPQA
191
RSPFP
196
LPIFQ
201
EVPFA
206
PPLCN
211
LPPLL
216
NHSVS
221
YPLAT
226
CPERN
231
VLFHS
236
LLNLA
241
QEDHS
246
FNAKP
251
FPSEL
256
Mutation Information
DNA mutation:
None
Peptide Range:
25 ~ 49
Mut AA position:
37 (13 in Wild Type peptide)
Alignment
Wild Type:
"WLGRWADWLGRWVGEFPLPRAIGQV
||||||||||||.||||||||||||
Mutant:
WLGRWADWLGRWGGEFPLPRAIGQV"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TEX38

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

None

Assay

IFNg ELISPOT assay