Immunogenicity 9787
Sample ID
3812
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
NUP43
Transcript ID
ENST00000367404
HLA INFO
A*68:01
TCR INFO
No TCR info found!
Full length protein sequence (284 aa)
MEEIY
1
AKFVS
6
QKISK
11
TRWRP
16
LPPGS
21
LQTAE
26
TFATG
31
SWDNE
36
ENYIS
41
LWSIG
46
DFGNL
51
DSDGG
56
FEGDH
61
QLLCD
66
IRHHG
71
DVMDL
76
QFFDQ
81
ERIVA
86
ASSTG
91
CVTVF
96
LHHPN
101
NQTLS
106
VNQQW
111
TTAHY
116
HTGPG
121
SPSYS
126
SAPCT
131
GVVCN
136
NPEIV
141
TVGED
146
GRINL
151
FRADH
156
KEAVR
161
TIVWE
166
VHFHP
171
SNPEH
176
LFTCS
181
EDGSL
186
WHWDA
191
STDVP
196
EKSSL
201
FHQGG
206
RSSTF
211
LSHSI
216
SNQAN
221
VHQSV
226
ISSWL
231
STDPA
236
KDRIE
241
ITSLL
246
PSRSL
251
SVNTL
256
DVLGP
261
CLVCG
266
TDAEA
271
IYVTR
276
HLFS
281
Mutation Information
DNA mutation:
None
Peptide Range:
216 ~ 240
Mut AA position:
228 (13 in Wild Type peptide)
Alignment
Wild Type:
"LSHSISNQANVHQSVISSWLSTDPA
||||||||||||.||||||||||||
Mutant:
LSHSISNQANVHHSVISSWLSTDPA"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) NUP43
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
None
Assay
IFNg ELISPOT assay