Immunogenicity 989

summary
Sample ID
3978
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
APOF
Transcript ID
ENST00000541105
HLA INFO
DRB*04:03
TCR INFO

No TCR info found!

T cell Tumor cell DRB*04:03
sequence
Full length protein sequence (308 aa)
MIPVE
1
LLLCY
6
LLLHP
11
VDATS
16
YGKQT
21
NVLMH
26
FPLSL
31
ESQTP
36
SSDPL
41
SCQFL
46
HPKSL
51
PGFSH
56
MAPLP
61
KFLVS
66
LALRN
71
ALEEA
76
GCQAD
81
VWALQ
86
LQLYR
91
QGGVN
96
ATQVL
101
IQHLR
106
GLQKG
111
RSTER
116
NVSVE
121
ALASA
126
LQLLA
131
REQQS
136
TGRVG
141
RSLPT
146
EDCEN
151
EKEQA
156
VHNVV
161
QLLPG
166
VGTFY
171
NLGTA
176
LYYAT
181
QNCLG
186
KARER
191
GRDGA
196
IDLGY
201
DLLMT
206
MAGMS
211
GGPMG
216
LAISA
221
ALKPA
226
LRSGV
231
QQLIQ
236
YYQDQ
241
KDANI
246
SQPET
251
TKEGL
256
RAISD
261
VSDLE
266
ETTTL
271
ASFIS
276
EVVSS
281
APYWG
286
WAIIK
291
SYDLD
296
PGAGS
301
LEI
306
Mutation Information
DNA mutation:
None
Peptide Range:
38 ~ 62
Mut AA position:
50 (13 in Wild Type peptide)
Alignment
Wild Type:
"QTPSSDPLSCQFLHPKSLPGFSHMA
||||||||||||.||||||||||||
Mutant:
QTPSSDPLSCQFMHPKSLPGFSHMA"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) APOF

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay